ReCombinatorics : The Algorithmics of Ancestral Recombination Graphs and Explicit Phylogenetic Networks /

Combinatorial structure and algorithms for deducing genetic recombination history, represented by ancestral recombination graphs and other networks, and their role in the emerging field of phylogenetic networks.

Détails bibliographiques
Auteur principal: Gusfield, Dan (Auteur)
Autres auteurs: Wu, Yufeng (Collaborateur), Song, Yun S. (Collaborateur), Langley, Charles H. (Collaborateur)
Format: Électronique eBook
Langue:Inglés
Publié: Cambridge, Massachusetts : The MIT Press, [2014]
Collection:Book collections on Project MUSE.
Sujets:
Genetic recombination.
Evolution (Biology)
MATHEMATICS > Combinatorics.
SCIENCE > Life Sciences > Biochemistry.
Recombinaison genetique.
Recombination, Genetic
Electronic books.
Accès en ligne:Texto completo
Table des matières:
  • Introduction
  • Trees first
  • A deeper introduction to recombination and networks
  • Exploiting recombination
  • First bounds
  • Fundamental combinatorial structure and tools
  • First uses of fundamental structure
  • Galled trees
  • General ARG construction methods
  • The History and Forest lower bounds
  • Conditions to guarantee a fully decomposed MinARG
  • Tree and ARG-based haplotyping
  • Tree and ARG-based association mapping
  • Extensions and connections
  • A short introduction to integer linear programming.

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