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Phage Therapy. Part A /

Detalles Bibliográficos
Clasificación:Libro Electrónico
Otros Autores: Singh, Vijai (Editor )
Formato: Electrónico eBook
Idioma:Inglés
Publicado: Cambridge, MA : Academic Press, 2023.
Colección:Progress in molecular biology and translational science ; 200.
Temas:
Acceso en línea:Texto completo
Tabla de Contenidos:
  • Front Cover
  • Title page
  • Copyright
  • Contents
  • Contributors
  • Praface
  • Chapter One: Exploring the potential of phage and their applications
  • 1 Introduction
  • 2 Life cycle of phage
  • 3 Applications of phage
  • 3.1 Phage for detection of bacterial pathogens
  • 3.2 Phage therapy for bacterial infections
  • 3.3 Phage in food industry
  • 3.4 Phage clinical trails
  • 3.5 Directed evolution and optimization of phage for enhanced therapy
  • 4 Conclusion and future remarks
  • Acknowledgements
  • References
  • Chapter Two: Isolation, screening and characterization of phageIsolation, screening and characterization of phage
  • 1 Introduction
  • 2 Become a phage-hunter: phage isolation
  • 2.1 Sources for phage isolation
  • 2.2 General scheme for phage isolation, with emphasis on jumbo phage
  • 2.3 Biased and unbiased isolation methods in phage isolation with highlight on advanced techniques
  • 2.4 Purification and amplification
  • 3 Phage characterization
  • 3.1 Phage screening
  • 3.1.1 Host range
  • 3.1.1.1 Solid-based methods
  • 3.1.1.1.1 Spot test for determination of phage host range.
  • 3.1.1.1.2 Relative efficiency of platting
  • 3.1.1.2 Liquid-based methods
  • 3.1.1.2.1 Microtiter plate host range assay.
  • 3.1.1.2.2 High-throughput turbidimetric test.
  • 3.1.2 Phage adsorption
  • 3.2 Morphological characterization
  • 3.2.1 Phage plaque morphology
  • 3.2.2 Virion structure morphology
  • 3.2.2.1 Transmission electron microscopy
  • 3.2.2.2 Scanning electron microscopy
  • 3.2.2.3 Atomic force microscopy
  • 3.2.2.4 Cryo-electron microscopy
  • 3.3 Biological characterization
  • 3.3.1 One-step growth curve
  • 3.3.2 Physical and chemical stability
  • 3.3.2.1 Temperature stability
  • 3.3.2.2 UV stability
  • 3.3.2.3 Chemical stability
  • 3.3.2.3.1 pH stability.
  • 3.3.2.3.2 Salinity and ions
  • 4 Genomic characterization.
  • 4.1 Phage genome from extraction to annotation
  • 4.2 Further screening of the phage genome
  • 4.2.1 Safety
  • 4.2.2 Temperate lifecycle gene-markers
  • 4.2.3 tRNA and ncRNA genes
  • 4.2.4 Holin-lysin lysis system
  • 4.2.5 Polysaccharide depolymerases
  • 4.2.6 Phage packaging mechanism
  • 4.2.7 Regulator elements: promoters and terminators
  • 4.3 Phage genome visualization and comparison
  • 4.4 Phage phylogenetic analysis
  • 4.4.1 At family level
  • 4.4.2 At genus and species levels
  • 5 Conclusion and future remarks
  • References
  • Further reading
  • Chapter Three: Synthetic phage and its application in phage therapy
  • 1 Introduction
  • 2 Structure
  • 2.1 Composition
  • 2.2 Morphology
  • 3 Classification
  • 4 Development of synthetic phage
  • 4.1 Homological remerging (HR)
  • 4.2 Genetic data rebooting
  • 5 Synthetic phages for substance redevelop
  • 5.1 Chemical engineering cue in synthetic phage
  • 5.2 Physical science cue control by synthetic phage
  • 5.3 Multifunctional phage materials
  • 6 Synthetic phage library
  • 6.1 Reconstruction of synthetic phage
  • 6.2 Genetic engineering of synthetic phage
  • 7 Production synthetic phage parts from phage genomes
  • 7.1 Phage RNA polymerases
  • 7.2 Transcriptional regulators
  • 7.3 Integrases
  • 8 Application
  • 8.1 Vaccine
  • 8.2 Phage therapy (PT)
  • 8.3 Selected protists Cells
  • 8.4 Phage display
  • 8.5 Nanomaterials
  • 8.6 Phages developed through genetic engineering to promote tissue formation
  • 8.7 Biofilms
  • 8.8 Phage-based affection
  • 8.9 Phage in the diagnostic of cancer
  • 8.10 Multidrug resistant
  • 8.11 Phage-based drug delivery
  • 8.12 Phage as anti-infective
  • 9 Conflicts in phage remedy of synthetic phage
  • 10 Conclusions
  • 11 Future with synthetic phage
  • References
  • Chapter Four: Phage engineering for development of diagnostic tools
  • 1 Introduction.
  • 3.1.4 Phage LUZ242s Igy peptide and DNA gyrase
  • 3.1.5 Summary table
  • 3.2 Interactions in Gram-positive bacteria
  • 4 Phage lysis of the host
  • 5 Modeling for phage therapy
  • 5.1 In vitro cell line models
  • 5.1.1 Cytotoxicity and pro-inflammatory characteristics
  • 5.1.2 Mechanisms of interaction with tissues
  • 5.2 Animal models
  • 5.2.1 Invertebrate models
  • 5.2.2 Vertebrate models
  • 5.2.3 Immunogenicity and toxicity in animal models
  • 5.3 Clinical trials in humans
  • 6 Conclusions
  • References
  • Chapter Seven: Phage and phage cocktails formulationsPhage and phage cocktails formulations
  • 1 Introduction
  • 2 Formulation of phage cocktails
  • 3 Applications of phage cocktails
  • 3.1 Application of phages in oral infections
  • 3.2 Application of phages in urinary tract infections
  • 3.3 Application of phages in biofilms treatment
  • 4 Conclusion and future perspectives
  • Conflict of interest
  • References
  • Chapter Eight: Phages for treatment of Escherichia coli infectionsPhages for treatment of Escherichia coli infections
  • 1 Introduction
  • 2 T4-related phages for E. coli therapy
  • 2.1 T4-related viruses infecting pathogenic E. coli strains
  • 2.2 Characterisation of T4-related viruses for phage therapy
  • 2.3 Isolation of bacteriophages from environmental sources
  • 2.4 Large-scale phage preparation
  • 2.5 Pharmaceutical formulation for phages
  • 2.6 Evaluation of T4-related bacteriophage preparations in animal models
  • 2.7 Case reports and clinical trials
  • 2.8 Phage therapy against pathogenic E. coli: current state and outlook for the future.
  • 3 Phage therapy of E. coli O157:H7
  • 3.1 Introduction to E. coli O157:H7
  • 3.2 General considerations for phages against E. coli O157:H7
  • 3.3 Bacteriophages in food processing
  • 3.4 Phage therapy in animals affected by E. coli O157:H7
  • 4 Phage therapy
  • HGT implications.
  • 5 Conclusions
  • References
  • Chapter Nine: Phages for treatment of Klebsiella pneumoniae infections Phages for treatment of Klebsiella pneumoniae infections
  • 1 Introduction
  • 2 Know your enemy: K. pneumoniae
  • 3 Limitations of antibiotic therapy for K. pneumoniae infections
  • 4 Phage therapy of K. pneumoniae
  • 4.1 Isolation of K. pneumoniae phages
  • 4.2 Morphotypes and taxonomy K. pneumoniae phages
  • 4.3 Forms of therapeutic K. pneumoniae phages
  • 4.4 In vitro characterization of K. pneumoniae phages
  • 4.5 In vivo experiments of phage therapy against K. pneumoniae
  • 4.6 Clinical studies on cases treated with Klebsiella phages
  • 4.7 Challenges in phage therapy for K. pneumoniae
  • 5 Conclusion
  • References
  • Chapter Ten: Phages for treatment of Salmonella spp infection
  • 1 Introduction
  • 2 Conventional treatment vs phage therapy
  • 3 Rapid screening and detection methods associated with bacteriophage for Salmonella
  • 4 Phages as a tool against Salmonella infections
  • 4.1 Salmonella phages
  • 4.2 Commercially available phage products and regulatory status
  • 4.3 Salmonella endolysins
  • 5 Challenges in using phages
  • 6 Future prospects
  • 7 Conclusion
  • Acknowledgments
  • References
  • Chapter Eleven: Phages for treatment of Staphylococcus aureus infection
  • 1 Introduction
  • 2 Identification, morphology and genomic characteristics of phages infecting S. aureus
  • 2.1 Organization of S. aureus phages genomes
  • 2.2 Structure and genome of phage K
  • 2.3 Novel Staphylococcal phages with unique morphology and broad host range
  • 2.3.1 Phage JD219
  • 2.3.2 Phages V1SA19, V1SA20, and V1SA22
  • 3 Phage cocktail development against S. aureus
  • 3.1 APTC-C-SA01: A novel bacteriophage cocktail for S. aureus and MRSA Biofilms
  • 3.2 Phage cocktail AB-SA01 targeting planktonic and biofilm cultures of S. aureus.