Computational Biology A Practical Introduction to BioData Processing and Analysis with Linux, MySQL, and R /

This greatly expanded 2nd edition provides a practical introduction to - data processing with Linux tools and the programming languages AWK and Perl - data management with the relational database system MySQL, and - data analysis and visualization with the statistical computing environment R for stu...

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Detalles Bibliográficos
Clasificación:Libro Electrónico
Autor principal: Wünschiers, Röbbe (Autor)
Autor Corporativo: SpringerLink (Online service)
Formato: Electrónico eBook
Idioma:Inglés
Publicado: Berlin, Heidelberg : Springer Berlin Heidelberg : Imprint: Springer, 2013.
Edición:2nd ed. 2013.
Temas:
Bioinformatics.
Proteins .
Biochemistry.
Application software.
Biophysics.
Computational and Systems Biology.
Protein Biochemistry.
Computer and Information Systems Applications.
Acceso en línea:Texto Completo
Tabla de Contenidos:
  • Part I Whetting Your Appetite
  • 1 Introduction
  • 2 Content of this Book
  • Part II Computer & Operating Systems
  • 3 Unix/Linux
  • Part III Working with Linux
  • 4 The First Touch
  • 5 Working with Files
  • 6 Remote Connections
  • 7 Playing
  • 8 Using the Shell
  • 9 Installing BLAST+ and ClustalW
  • 10 Shell Programming
  • 11 Regular Expressions
  • 12 Sed
  • Part IV Programming
  • 13 AWK
  • 14 Perl
  • 15 Other Programming Languages
  • Part V Advanced Data Analysis
  • 16 Relational Databases with MySQL
  • 17 The Statistics Suite R
  • Part VI Worked Examples
  • 18 Genomic Analysis of the Pathogenicity Factors from E. coli Strain O157:H7 and EHEC Strain O104:H4
  • 19 Limits of BLAST & Homology Modeling
  • 20 Virtual Sequencing of pUC18c
  • 21 Querying for Potential Redox-Regulated Enzymes
  • Part VII Additional Material
  • References
  • A Supplementary Information
  • Solutions
  • Index.

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