Computational Biology A Practical Introduction to BioData Processing and Analysis with Linux, MySQL, and R /

This greatly expanded 2nd edition provides a practical introduction to - data processing with Linux tools and the programming languages AWK and Perl - data management with the relational database system MySQL, and - data analysis and visualization with the statistical computing environment R for stu...

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Detalles Bibliográficos
Clasificación:Libro Electrónico
Autor principal: Wünschiers, Röbbe (Autor)
Autor Corporativo: SpringerLink (Online service)
Formato: Electrónico eBook
Idioma:Inglés
Publicado: Berlin, Heidelberg : Springer Berlin Heidelberg : Imprint: Springer, 2013.
Edición:2nd ed. 2013.
Temas:
Bioinformatics.
Proteins .
Biochemistry.
Application software.
Biophysics.
Computational and Systems Biology.
Protein Biochemistry.
Computer and Information Systems Applications.
Acceso en línea:Texto Completo

MARC

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245 1 0 |a Computational Biology  |h [electronic resource] :  |b A Practical Introduction to BioData Processing and Analysis with Linux, MySQL, and R /  |c by Röbbe Wünschiers. 
250 |a 2nd ed. 2013. 
264 1 |a Berlin, Heidelberg :  |b Springer Berlin Heidelberg :  |b Imprint: Springer,  |c 2013. 
300 |a XXIX, 449 p.  |b online resource. 
336 |a text  |b txt  |2 rdacontent 
337 |a computer  |b c  |2 rdamedia 
338 |a online resource  |b cr  |2 rdacarrier 
347 |a text file  |b PDF  |2 rda 
505 0 |a Part I Whetting Your Appetite -- 1 Introduction -- 2 Content of this Book -- Part II Computer & Operating Systems -- 3 Unix/Linux -- Part III Working with Linux -- 4 The First Touch -- 5 Working with Files -- 6 Remote Connections -- 7 Playing -- 8 Using the Shell -- 9 Installing BLAST+ and ClustalW -- 10 Shell Programming -- 11 Regular Expressions -- 12 Sed -- Part IV Programming -- 13 AWK -- 14 Perl -- 15 Other Programming Languages -- Part V Advanced Data Analysis -- 16 Relational Databases with MySQL -- 17 The Statistics Suite R -- Part VI Worked Examples -- 18 Genomic Analysis of the Pathogenicity Factors from E. coli Strain O157:H7 and EHEC Strain O104:H4 -- 19 Limits of BLAST & Homology Modeling -- 20 Virtual Sequencing of pUC18c -- 21 Querying for Potential Redox-Regulated Enzymes -- Part VII Additional Material -- References -- A Supplementary Information -- Solutions -- Index. 
520 |a This greatly expanded 2nd edition provides a practical introduction to - data processing with Linux tools and the programming languages AWK and Perl - data management with the relational database system MySQL, and - data analysis and visualization with the statistical computing environment R for students and practitioners in the life sciences. Although written for beginners, experienced researchers in areas involving bioinformatics and computational biology may benefit from numerous tips and tricks that help to process, filter and format large datasets. Learning by doing is the basic concept of this book. Worked examples illustrate how to employ data processing and analysis techniques, e.g. for - finding proteins potentially causing pathogenicity in bacteria, - supporting the significance of BLAST with homology modeling, or - detecting candidate proteins that may be redox-regulated, on the basis of their structure. All the software tools and datasets used are freely available. One section is devoted to explaining setup and maintenance of Linux as an operating system independent virtual machine. The author's experiences and knowledge gained from working and teaching in both academia and industry constitute the foundation for this practical approach. 
650 0 |a Bioinformatics. 
650 0 |a Proteins . 
650 0 |a Biochemistry. 
650 0 |a Application software. 
650 0 |a Biophysics. 
650 1 4 |a Computational and Systems Biology. 
650 2 4 |a Bioinformatics. 
650 2 4 |a Protein Biochemistry. 
650 2 4 |a Biochemistry. 
650 2 4 |a Computer and Information Systems Applications. 
650 2 4 |a Biophysics. 
710 2 |a SpringerLink (Online service) 
773 0 |t Springer Nature eBook 
776 0 8 |i Printed edition:  |z 9783642347481 
776 0 8 |i Printed edition:  |z 9783642347504 
776 0 8 |i Printed edition:  |z 9783642430978 
776 0 8 |i Printed edition:  |z 9783662561607 
856 4 0 |u https://doi.uam.elogim.com/10.1007/978-3-642-34749-8  |z Texto Completo 
912 |a ZDB-2-SBL 
912 |a ZDB-2-SXB 
950 |a Biomedical and Life Sciences (SpringerNature-11642) 
950 |a Biomedical and Life Sciences (R0) (SpringerNature-43708) 

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