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Functional microbiomes Volume 67 /

Detalles Bibliográficos
Clasificación:Libro Electrónico
Formato: Electrónico eBook
Idioma:Inglés
Publicado: [Place of publication not identified] : Academic Press, 2022.
Colección:Advances in ecological research ; v. 67.
Temas:
Acceso en línea:Texto completo

MARC

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245 0 0 |a Functional microbiomes  |n Volume 67 /  |c edited by David A. Bohan, Alex Dumbrell. 
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490 1 |a Advances in ecological research ;  |v v. 67 
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505 0 |a Intro -- Functional Microbiomes -- Copyright -- Contents -- Contributors -- Preface: Functional Microbiomes -- Chapter One: Linking microbial body size to community co-occurrences and stability at multiple geographical scales in agr ... -- 1. Introduction -- 2. Methods -- 2.1. Sample sites and data collection -- 2.2. Molecular methods, metabarcoding and bioinformatics -- 2.3. Determination of microbial body sizes -- 2.4. Statistical analysis -- 3. Results -- 3.1. Inferring microbial community structure and body size -- 3.2. Microbial niche breadth, niche overlap, and migration rate -- 3.3. Co-occurrence patterns of different microbial groups -- 3.4. Cohesion of differently sized microorganisms -- 3.5. Community stability of differently sized microorganisms -- 4. Discussion -- 5. Data accessibility statement -- Acknowledgements -- References -- Chapter Two: The functional microbiome of grapevine throughout plant evolutionary history and lifetime -- 1. Introduction -- 2. The grapevine functional microbiome throughout evolutionary history -- 2.1. Microbiome evolution during grapevine domestication and breeding -- 2.2. Microbial interactions in the centre of origin of major grapevine pathogens -- 2.3. Microbial dispersal across geographic regions and Vitis species -- 3. The grapevine functional microbiome throughout plant lifetime -- 3.1. Initial microbiome and virome at the graft stage -- 3.2. Recruitment of the root microbiome from the soil reservoir -- 3.3. Seasonal assembly of the leaf microbiome in interaction with leaf pathogens -- 3.4. Dynamics of the berry microbiome to ripening and winemaking -- 3.5. Wood microbiome dysbiosis during grapevine aging and decline -- 4. Let�s make the grapevine microbiome more functional -- 4.1. Field sampling designs and statistical approaches to identify beneficial microbial taxa. 
505 8 |a Question #1: How to identify microbial taxa enhancing plant tolerance to drought or providing a barrier effect against micr ... -- 4.2. Molecular tools to uncover the functional potential of the microbiome -- Question #2: How to characterise the functional potential of the grapevine microbiome with shotgun metagenomics? -- Question #3: How to decipher the functional coupling between grapevine and its microbiome with quantitative approaches? -- 4.3. Computational approaches to understand the grapevine holobiont as a functional and dynamic network -- Question #4: How to identify and characterise ecological interactions between grapevine-associated microorganisms using met ... -- Question #5: How to decipher metabolic interactions within the grapevine microbiome using shotgun metagenomics? -- Question #6: How to infer microbial interactions shaping microbiome dynamics from time-series? -- 4.4. Culture-dependent approaches to validate microbial interactions and functions -- Question #7: How to isolate and culture microorganisms from the grapevine microbiome to study their functions and their int ... -- 5. Conclusion and perspectives -- Acknowledgements -- References -- Chapter Three: Compendium of analytical methods for sampling, characterization and quantification of bioaerosols -- 1. Introduction -- 2. Air sampling methods -- 2.1. Active vs passive sampling -- 2.1.1. Overview of active sampling systems -- 2.1.2. Overview of passive sampling systems -- 2.2. Which air sampling method is best for cultivation or molecular analyses? -- 2.3. Which air sampling method is best for which biological particle? -- 2.3.1. Fungi -- 2.3.2. Bacteria -- 2.3.3. Archaea -- 2.3.4. Viruses -- 2.3.5. The air resistome -- 2.3.6. Pollen, endotoxins, and other allergens -- 2.4. Additional sampling considerations. 
505 8 |a 4.3.2. Waste-processing environments -- 4.3.2.1. Wastewater treatment plant (WWTP) -- 4.3.2.2. Composting facilities -- 4.3.3. Agriculture/farming/food production -- 4.3.3.1. Poultry farms -- 4.3.3.2. Dairy farms -- 4.3.3.3. Slaughterhouse -- 4.3.4. Clinical settings -- 4.3.4.1. Hospitals and healthcare settings -- 4.3.4.2. Dentists -- 4.3.4.3. Podiatry -- 4.4. Summary of sampling and analysis methods to assess exposure and risk -- 4.5. Recommendations and guidelines for assessment of exposure and human health risk -- 5. Conclusions and future perspectives -- Acknowledgements -- List of contributors -- References -- Chapter Four: A microbial solution to oil sand pollution: Understanding the microbiomes, metabolic pathways and mechanism ... -- 1. Introduction -- 1.1. The challenges with naphthenic acids (NAs) -- 2. Natural vs anthropogenic naphthenic acid (NA) exposed microbiomes -- 2.1. Natural exposed microbiomes: Freshwater sediments -- 2.1.1. Lotic systems (river sediments) -- 2.1.2. Lentic systems (wetland sediments) -- 2.2. Groundwaters -- 2.3. Marine ecosystems -- 2.4. Bitumen saturated outcrop deposits -- 2.5. Deep oil sand deposits -- 3. Anthropogenic naphthenic acid (NA) contaminated microbiomes -- 3.1. Oil sand tailings ponds (OSTPs) -- 3.2. Oil sands process affected water (OSPW) -- 3.3. Mature fine tailings (MFT) -- 3.4. End pit lakes (EPLs) and reclaimed ponds -- 3.5. Biofilms, bioreactors and biofilters -- 4. Biodegradation of naphthenic acids (NAs) -- 4.1. Factors affecting naphthenic acid (NA) biodegradation rates -- 4.2. Aerobic vs anaerobic biodegradation of naphthenic acids (NAs) -- 4.3. Naphthenic acid (NA)-degrading microorganisms -- 4.4. Metabolic pathways of naphthenic acid (NA) biodegradation -- 4.5. Mechanisms involved in naphthenic acid (NA) biodegradation and detoxification -- 5. Conclusions -- 6. Future perspectives. 
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776 0 8 |i Print version:  |t MICROBIOME REGULATED INTERACTIONS AND BEHAVIOURS.  |d [Place of publication not identified] : ELSEVIER ACADEMIC PRESS, 2022  |z 0323985939  |w (OCoLC)1310615160 
830 0 |a Advances in ecological research ;  |v v. 67. 
856 4 0 |u https://sciencedirect.uam.elogim.com/science/bookseries/00652504/67  |z Texto completo