Comprehensive foodomics /

"Comprehensive Foodomics offers a definitive collection of over 150 articles that provide researchers with innovative answers to crucial questions relating to food quality, safety and its vital and complex links to our health. Topics covered include transcriptomics, proteomics, metabolomics, ge...

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Detalles Bibliográficos
Clasificación:Libro Electrónico
Otros Autores: Cifuentes, Alejandro (Editor )
Formato: Electrónico eBook
Idioma:Inglés
Publicado: [Amsterdam] : Elsevier, [2021]
Temas:
Food industry and trade.
Food industry and trade > Safety measures.
Food industry and trade > Quality control.
Aliments > Industrie et commerce > Qualit�e > Contr�ole.
Acceso en línea:Texto completo
Tabla de Contenidos:
  • 9780128163962v1_WEB
  • Front Cover
  • COMPREHENSIVE FOODOMICS
  • COMPREHENSIVE FOODOMICS
  • Copyright
  • EDITORIAL BOARD
  • Editor in Chief
  • Editors
  • CONTRIBUTORS TO VOLUME 1
  • PREFACE
  • 1.54.1 Genomics
  • 1.54.2 Epigenetics and Noncoding RNA
  • 1.54.3 Transcriptomics
  • 1.54.4 Proteomics
  • 1.54.5 Metabolomics
  • 1.54.6 Omics Data Treatment, Systems Biology, and Foodomics
  • 1.54.7 Green Foodomics
  • 1.54.8 Food Safety and Foodomics
  • 1.54.9 Food Quality, Traceability, and Foodomics
  • 1.54.10 Food Bioactivity, Health, and Foodomics
  • CONTENTS OF ALL VOLUMES
  • PERMISSION ACKNOWLEDGMENTS
  • 1.01 -Introduction to Genomics
  • 1.02 -The Genomics Revolution: Agri-Food Research in the 21st Century
  • 1.02.1 Modern Challenges to the Agri-Food Sector
  • 1.02.2 Introduction to Sequencing Technologies
  • 1.02.3 Bioinformatics
  • An Introduction to Commonly Used Pipelines and Platforms for Sequencing Data
  • 1.02.3.1 Metagenomic Tools
  • 1.02.3.2 Web-Based Tools for Sequence Analysis
  • 1.02.4 Genotypes of Importance to Public Health
  • 1.02.5 Clostridioides difficile
  • An Example of a One Health Challenge
  • 1.02.6 Future Directions for the Agri-Food Sector
  • 1.02.6.1 Probiotics to Aid in Gut Health
  • 1.02.6.2 Food Fraud and HTS (High-Throughput Sequencing)
  • 1.02.6.3 CRISPR-Cas9
  • 1.02.6.3.1 Application of CRISPR-Cas to Plants/Crops
  • 1.02.6.3.2 Applications of CRISPR-Cas to Transform Livestock
  • 1.02.6.3.3 Applications of CRISPR-Cas in Bacteria
  • 1.02.7 Conclusions
  • References
  • Relevant web pages
  • 1.03 -Next Generation Sequencing Methods: Pushing the Boundaries
  • 1.03.1 Introduction
  • 1.03.2 Nucleic Acid Extraction
  • 1.03.2.1 High Molecular Weight DNA Extractions
  • 1.03.3 Sequencing of DNA Barcodes
  • 1.03.3.1 Metabarcoding and the Microbiome
  • 1.03.3.2 16S Sequencing Design
  • 1.03.3.3 Full Length 16S Sequencing
  • 1.03.3.4 Direct 16S rRNA Sequencing
  • 1.03.4 Whole Genome Sequencing
  • 1.03.4.1 Shotgun Sequencing Methods
  • 1.03.4.2 Long Read Sequencing
  • 1.03.4.3 Targeted Sequencing
  • 1.03.5 Metagenomic Sequencing
  • 1.03.5.1 Synthetic Long-Read Sequencing
  • 1.03.5.2 Hi-C
  • 1.03.5.3 Host Depletion and Microbial Enrichment
  • 1.03.6 Transcriptomics
  • 1.03.6.1 rRNA Removal
  • 1.03.6.2 Long Read Transcriptomics
  • 1.03.6.3 Experimental Design Considerations for RNA-Seq
  • 1.03.7 Analysis
  • 1.03.8 Applications
  • 1.03.8.1 Food Safety and Human Health
  • 1.03.8.2 Food Waste Valorization
  • 1.03.8.3 Synthetic Biology
  • 1.03.9 The Future of NGS
  • 1.03.10 Conclusions
  • References
  • 1.04 -NexGen Sequencing Data: Bioinformatic Tools for Visualization and Analysis
  • 1.04.1 Introduction
  • 1.04.1.1 History of DNA Sequencing and Annotation Through the Lactic Acid Bacteria Lens
  • 1.04.1.2 Visualization of Genomic Data
  • 1.04.2 DNA Sequencing and Genome Assembly
  • 1.04.2.1 The Impact of Sequencing Technologies on Assembly Choices
  • 1.04.2.2 The Assemblers: How They Work

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