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Proceedings of the 5th Asia-Pacific bioinformatics conference : Hong Kong, 15-17 January 2007 /

High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases con...

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Detalles Bibliográficos
Clasificación:Libro Electrónico
Autor Corporativo: Asia-Pacific Bioinformatics Conference Hong Kong
Otros Autores: Sankoff, David, Wang, Lusheng, 1962-, Chin, Francis, 1948-
Formato: Electrónico Congresos, conferencias eBook
Idioma:Inglés
Publicado: London : Imperial College Press, ©2007.
Colección:Series on advances in bioinformatics and computational biology ; v. 5.
Temas:
Acceso en línea:Texto completo
Tabla de Contenidos:
  • Exploring Genomes of Distantly Related Mammals / J.A. Marshall Graves
  • Bugs, Guts and Fat
  • A Systems Approach to the Metabolic 'Axis of Evil' / J. Nadeau
  • Protein Identification via Spectral Networks Analysis / P. Pevzner
  • Metagenome Analysis using MEGAN / D.H. Huson, A.F. Auch, J. Qi, and S.C. Schuster
  • Algorithmic Approaches to Selecting Control Clones in DNA Array Hybridization Experiments / Q. Fu, E. Bent, J. Borneman, M. Chrobak, and N. Young
  • Subtle Motif Discovery for Detection of DNA Regulatory Sites / M. Comin, and L. Parida
  • An Effective Promoter Detection Method using the Adaboost Algorithm / X. Xze, S. Wu, K.-M. Lam, and H. Yan
  • A New Strategy of Geometrical Biclustering for Microarray Data Analysis / H. Zhao, A.W.C. Liew, and H. Yan
  • Using Formal Concept Analysis for Microarray Data Comparison / V. Choi, Y. Huang, V. Lam, D. Potter, R. Laubenbacher, and K. Duca
  • An Efficient Biclustering Algorithm for Finding Genes with Similar Patterns in Time-series Expression Data / S.C. Madeira, and A.L. Oliveira
  • Selecting Genes with Dissimilar Discrimination Strength for Sample Class Prediction / Z. Cai, R. Goebel, M.R. Salavatipour, Y. Shi, L. Xu, and G. Lin
  • Computing the All-Pairs Quartet Distance on a Set of Evolutionary Trees / M. Stissing, T. Mailund, C.N.S. Pedersen, G.S. Brodal, and R. Fagerberg
  • Computing the Quartet Distance Between Evolutionary Trees of Bounded Degree / M. Stissing, C.N.S. Pedersen, T. Mailund, G.S. Brodal, and R. Fagerberg
  • A Global Maximum Likelihood Super-Quartet Phylogeny Method / P. Wang, B.B. Zhou, M. Taraeneh, D. Chu, C. Wang, A.Y. Zomaya, and R.P. Brent
  • A Randomized Algorithm for Comparing Sets of Phylogenetic Trees / S.-J. Sul, and T.L. Williams
  • Protein Structure-Structure Alignment with Discrete Frkchet Distance / M. Jiang, Y. Xu, and B. Zhu
  • Deriving Protein Structure Topology from the Helix Skeleton in Low Resolution Density Map using Rosetta / Y. Lu, J. He, and C.E.M. Strauss
  • Fitting Protein Chains to Cubic Lattice is NP-complete / J. Mafiuch, and D.R. Gaur
  • Inferring a Chemical Structure from a Feature Vector Based on Frequency of Labeled Paths and Small Fragments / T. Alcutsu, and D. Fukagawa
  • Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs / G. Huang, P. Jeavons, and D. Kwiatkowski
  • Genotype-Based Case-Control Analysis, Violation of Hardy-Weinberg Equilibrium, and Phase Diagrams / Y.J. Suh, and W. Li
  • A Probabilistic Method to Identify Compensatory Substitutions for Pathogenic Mutations / B.C. Easton, A.V. Isaev, G.A. Huttley, and P. Maxwell
  • Exploring Genome Rearrangements using Virtual Hybridization / M. Belcaid, A. Bergeron, A. Chateau, C. Chauve, Y. Gingras, G. Poisson, and M. Vendette
  • Two Plus Two Does not Equal Three: Statistical Tests for Multiple Genome Comparison / N. Raghupathy, R. Hoberman, and D. Durand
  • The Distance Between Randomly Constructed Genomes / W. Xu
  • Computing the Breakpoint Distance between Partially Ordered Genomes / Z. Fu, and T. Jiang
  • Inferring Gene Regulatory Networks by Machine Learning Methods / J. Supper, H. Frohlich, C. Spieth, A. Drager, and A. Zell
  • A Novel Clustering Method for Analysis of Biological Networks using Maximal Components of Graphs / M. Hayashida, T. Akutsu, and H. Nagamochi
  • Gene Regulatory Network Inference via Regression Based Topological Refinement / J. Supper, H. Frohlich, and A. Zell
  • Algorithm Engineering for Color-Coding to Facilitate Signaling Pathway Detection / F. Huffner, S. Wernicke, and T. Zichner
  • De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags / K. Ning, K.F. Chong, and H.W. Leong
  • Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry / B. Shun, B. Ma, K. Zhang, and G. Lajoie
  • Semi-supervised Pattern Learning for Extracting Relations from Bioscience Texts / S. Ding, M. Huang, and X. Zhu
  • Flow Model of the Protein-protein Interaction Network for Finding Credible Interactions / K. Okada, K. Asai, and M. Arzta
  • All Hits All The Time: Parameter Free Calculation of Seed Sensitivity / D.Y.F. Mak. and G. Benson
  • Fast Structural Similarity Search Based on Topology String Matching / S.-H. Park, D. Gilbert, and K.H. Ryu
  • Simple and Fast Alignment of Metabolic Pathways by Exploiting Local Diversity / S. Wernicke, and F. Rasche
  • Combining N-grams and Alignment in G-protein Coupling Specificity Prediction / B.Y.M. Chen, and J.G. Carbonell.