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Proceedings of the 6th Asia-Pacific Bioinformatics Conference : Kyoto, Japan, 14-17 January 2008 /
High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, thus enabling large-scale genotyping and gene expression profiling of human populations. Databases contai...
| Clasificación: | Libro Electrónico |
|---|---|
| Autor Corporativo: | |
| Otros Autores: | , , |
| Formato: | Electrónico Congresos, conferencias eBook |
| Idioma: | Inglés |
| Publicado: |
London : Hackensack, NJ :
Imperial College Press ; Distributed by World Scientific Pub.,
©2008.
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| Colección: | Series on advances in bioinformatics and computational biology ;
v. 6. |
| Temas: | |
| Acceso en línea: | Texto completo |
Tabla de Contenidos:
- Recent progress in phylogenetic combinatorics / Andreas Dress
- KEGG for medical and pharmaceutical applications / Minoru Kanehisa
- Protein interactions extracted from Genomes and papers / Alfonso Valencia
- String kernels with feature selection for SVM protein classification / Wen-Yun Yang and Bao-Liang Lu
- Predicting nucleolar proteins using support-vector machines / Mikael Boden
- Supervised ensembles of prediction methods for subcellular localization / Johannes A[beta]falg [and others]
- Chemical compound classification with automatically mined structure patterns / Aaron M. Smalter, J. Huan and Gerald H. Lushington
- Structure-approximating design of stable proteins in 2D HP model fortified by cysteine monomers / Alireza Hadj Khodabakhshi [and others]
- Discrimination of native folds using network properties of protein structures / Alper Kucukural, O. Ugur Sezerman and Aytul Ercil
- Interacting amino acid preferences of 3D pattern pairs at the binding sites of transient and obligate protein complexes / Suryani Lukman [and others]
- Structural descriptors of protein-protein binding sites / Oliver Sander [and others]
- A memory efficient algorithm for structural alignment of RNAs with embedded simple pseudoknots / Thomas Wong [and others]
- A novel method for reducing computational complexity of whole genome sequence alignment / Ryuichiro Nakato and Osamu Gotoh
- fRMSDAlign: protein sequence alignment using predicted local structure information for pairs with low sequence identity / Huzefa Rangwala and George Karypis
- Run probability of high-order seed patterns and its applications to finding good transition seeds / Jialiang Yang and Louxin Zhang
- Seed optimization is no easier than optimal Golomb ruler design / Bin Ma and Hongyi Yao
- Integrating hierarchical controlled vocabularies with OWL ontology: a case study from the domain of molecular interactions / Melissa J. Davis [and others]
- Semantic similarity definition over gene ontology by further mining of the information content / Yuan- Peng Li and Bao- Liang Lu
- From text to pathway: corpus annotation for knowledge acquisition from biomedical literature / Jan-Dong Kim [and others]
- Classification of protein sequences based on word segmentation methods / Yang Yang, Bao-Liang Lu and Wen-Yun Yang
- Analysis of structural strand asymmetry in non-coding RNAs / Jaayu Wen, Brian J. Parker and Georg F. Weiller
- Finding non-coding RNAs through genome-scale clustering / Huei-Hun Tseng [and others]
- A fixed-parameter approach for weighted cluster editing / Sebastian Bocker [and others]
- Image compression-based approach to measuring the similarity of protein structures / Morihiro Hayashida and Tatsuya Akutsu
- Genome halving with double cut and join / Robert Warren and David Sankoff
- Phylogenetic reconstruction from complete gene orders of whole genomes / Krister M. Swenson [and others]
- SPR-based tree reconciliation: non-binary trees and multiple solutions / Cuong Than and Luay Nakhleh
- Alignment of minisatellite maps: a minimum spanning tree-based approach / Mohamed I. Abouelhoda [and others]
- Metabolic pathway alignment (M-Pal) reveals diversity and alternatives in conserved networks / Yunlei Li [and others]
- Automatic modeling of signal pathways from protein-protein interaction networks / Xingming Zhao [and others]
- Simultaneously segmenting multiple gene expression time courses by analyzing cluster dynamics / Satish Tadepall [and others]
- Symbolic approaches for finding control strategies in boolean networks / Christopher James Langmead and Sumit Kumar Jha
- Estimation of population allele frequencies from small samples containing multiple generations / Dmitry A. Konovalov and Dik Heg
- Linear time probabilistic algorithms for the singular haplotype reconstruction problem from SNP fragments / Zhixiang Chen [and others]
- Optimal algorithm for finding DNA motifs with nucleotide adjacent dependency / Francis Y.L. Chin [and others]
- Primer selection methods for detection of genomic inversions and deletions via PAMP / Bhaskar DasGupta, Jin Jun and Ion I. Mandoiu
- GenePC and ASPIC integrate gene predictions with expressed sequence alignments to predict alternative transcripts / Tyler S. Alioto [and others]
- Comparing and analysing gene expression patterns across animal species using 4DXpress / Yannick Haudry [and others]
- Near-sigmoid modeling to simultaneously profile genome-wide DNA replication timing and efficiency in single DNA replication microarray studies / Juntao Li [and others].