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Microarrays : current technology, innovations and applications /
Microorganisms are the most diverse group of organisms and play important and distinctive roles in their ecosystems. They interact with their peers and other organisms (e.g., plants, animals) to form a complicated food web, significantly impacting ecosystem functions and services. However, understan...
| Clasificación: | Libro Electrónico |
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| Otros Autores: | |
| Formato: | Electrónico eBook |
| Idioma: | Inglés |
| Publicado: |
Norfolk, UK :
Caister Academic Press,
[2014]
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| Temas: | |
| Acceso en línea: | Texto completo |
Tabla de Contenidos:
- Contents ; Contributors; Contributors; Preface; Preface; 1: Microarrays for Microbial Community Analysis at a Glance; Introduction; 1: Microarrays for Microbial Community Analysis at a Glance; Introduction; Microarrays for microbial community analysis at a glance; Microarrays for microbial community analysis at a glance; Key issues for microarray analysis; Key issues for microarray analysis; Applications of microarrays for profiling microbial communities; Applications of microarrays for profiling microbial communities.
- Advantages and limitations of microarrays for microbial community analysisAdvantages and limitations of microarrays for microbial community analysis; Conclusions and future directions; Conclusions and future directions; 2: Software Tools for the Selection of Oligonucleotide Probes for Microarrays; Introduction; 2: Software Tools for the Selection of Oligonucleotide Probes for Microarrays; Introduction; General criteria for probe design; General criteria for probe design; Probe design algorithms for microbial DNA microarrays; Probe design algorithms for microbial DNA microarrays.
- Discussion/challenges and future trendsDiscussion/challenges and future trends; Conclusions; Online resources for oligonucleotide probe design programs and databases; Conclusions; Online resources for oligonucleotide probe design programs and databases; 3: Development and Evaluation of Functional Gene Arrays with GeoChip as an Example; Introduction; 3: Development and Evaluation of Functional Gene Arrays with GeoChip as an Example; Introduction; FGA development; FGA development; FGA construction and experimental evaluation; FGA construction and experimental evaluation.
- Core functional gene families covered by GeoChipsCore functional gene families covered by GeoChips; Challenges and future directions; Challenges and future directions; 4: Microarray Data Analysis; Introduction; Microarray image process; 4: Microarray Data Analysis; Introduction; Microarray image process; Microarray data preprocessing; Microarray data preprocessing; Statistical analysis; Statistical analysis; Conclusions/challenges and future trends; Conclusions/challenges and future trends; 5: Microarray of 16S rRNA Gene Probes for Quantifying Population Differences Across Microbiome Samples.
- IntroductionMicroarray of 16S rRNA Gene Probes for Quantifying Population Differences Across Microbiome Samples; Introduction; PhyloChip G3 data analysis; PhyloChip G3 data analysis; Discussion and future trends; Discussion and future trends; Conclusions; Conclusions; 6: GeoChip Applications in Bioremediation Studies; Introduction; Functional gene arrays for bioremediation studies; 6: GeoChip Applications in Bioremediation Studies; Introduction; Functional gene arrays for bioremediation studies; GeoChip design; GeoChip design; Application of GeoChip to bioremediation studies.