Cargando…
Bioinformatics : High Performance Parallel Computer Architectures.
Introduces the parallel architectures, their corresponding programming paradigms, and their bioinformatics applications. This title provides background on sequential bioinformatics algorithms and parallel architectures such as multi-cores, Cell BE, GPUs, and FPGAs.
| Clasificación: | Libro Electrónico |
|---|---|
| Autor principal: | |
| Formato: | Electrónico eBook |
| Idioma: | Inglés |
| Publicado: |
Hoboken :
CRC Press,
2010.
|
| Colección: | Embedded Multi-Core Systems
|
| Temas: | |
| Acceso en línea: | Texto completo |
Tabla de Contenidos:
- Front cover; Contents; Editor; Contributors; Chapter 1: Algorithms for Bioinformatics; Chapter 2: Introduction to GPGPUs andMassively Threaded Programming; Chapter 3: FPGA: Architecture and Programming; Chapter 4: Parallel Algorithms forAlignments on the Cell BE; Chapter 5: Orchestrating the PhylogeneticLikelihood Function on EmergingParallel Architectures; Chapter 6: Parallel Bioinformatics Algorithmsfor CUDA-Enabled GPUs; Chapter 7: CUDA Error Correction Method forHigh-Throughput Short-Read Sequencing Data; Chapter 8: FPGA Acceleration of SeededSimilarity Searching.
- Chapter 9: Seed-Based Parallel Protein SequenceComparison Combining Multithreading, GPU, and FPGA TechnologiesChapter 10: Database Searching with Profi le-HiddenMarkov Models on Reconfi gurableand Many-Core Architectures; Chapter 11: COPACOBANA: A Massively ParallelFPGA-Based Computer Architecture; Chapter 12: Accelerating String Set Matching forBioinformatics Using FPGA Hardware; Chapter 13: Reconfi gurable Neural System and ItsApplic.