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Lecture notes on computational structural biology /

While the field of computational structural biology or structural bioinformatics is rapidly developing, there are few books with a relatively complete coverage of such diverse research subjects studied in the field as X-ray crystallography computing, NMR structure determination, potential energy min...

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Detalles Bibliográficos
Clasificación:Libro Electrónico
Autor principal: Wu, Zhijun
Formato: Electrónico eBook
Idioma:Inglés
Publicado: Singapore, SG : World Scientific, ©2008.
Temas:
Acceso en línea:Texto completo

MARC

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100 1 |a Wu, Zhijun. 
245 1 0 |a Lecture notes on computational structural biology /  |c Zhijun Wu. 
260 |a Singapore, SG :  |b World Scientific,  |c ©2008. 
300 |a 1 online resource (xii, 230 pages) :  |b illustrations (some color) 
336 |a text  |b txt  |2 rdacontent 
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380 |a Bibliography 
504 |a Includes bibliographical references and index. 
588 0 |a Print version record. 
520 |a While the field of computational structural biology or structural bioinformatics is rapidly developing, there are few books with a relatively complete coverage of such diverse research subjects studied in the field as X-ray crystallography computing, NMR structure determination, potential energy minimization, dynamics simulation, and knowledge-based modeling. This book helps fill the gap by providing such a survey on all the related subjects. Comprising a collection of lecture notes for a computational structural biology course for the Program on Bioinformatics and Computational Biology at Iowa State University, the book is in essence a comprehensive summary of computational structural biology based on the author's own extensive research experience, and a review of the subject from the perspective of a computer scientist or applied mathematician. Readers will gain a deeper appreciation of the biological importance and mathematical novelty of the research in the field. 
505 0 |a 1. Introduction. 1.1. Protein structure. 1.2. Structure determination. 1.3. Dynamics simulation. 1.4. The myth of protein folding -- 2. X-ray crystallography computing. 2.1. The phase problem. 2.2. Least squares solutions. 2.3. Entropy maximization. 2.4. Indirect methods -- 3. NMR structure determination. 3.1. Nuclear magnetic resonance. 3.2. Distance geometry. 3.3. Distance-based modeling. 3.4. Structural analysis -- 4. Potential energy minimization. 4.1. Potential energy function. 4.2. Local optimization. 4.3. Global optimization. 4.4. Energy transformation -- 5. Molecular dynamics simulation. 5.1. Equations of motion. 5.2. Initial-value problem. 5.3. Boundary-value problem. 5.4. Normal mode analysis -- 6. Knowledge-based protein modeling. 6.1. Sequence/structural alignment. 6.2. Fold recognition/inverse folding. 6.3. Knowledge-based structural refinement. 6.4. Structural computing and beyond. 
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650 0 |a Proteins  |x Structure  |x Computer simulation. 
650 0 |a Protein folding  |x Computer simulation. 
650 0 |a Proteins  |x Structure  |x Mathematical models. 
650 0 |a Protein folding  |x Mathematical models. 
650 0 |a Computational biology. 
650 0 |a Bioinformatics. 
650 6 |a Protéines  |x Structure  |x Simulation par ordinateur. 
650 6 |a Protéines  |x Structure  |x Modèles mathématiques. 
650 6 |a Protéines  |x Repliement  |x Modèles mathématiques. 
650 6 |a Bio-informatique. 
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650 7 |a Protein folding  |x Computer simulation  |2 fast 
650 7 |a Protein folding  |x Mathematical models  |2 fast 
650 7 |a Proteins  |x Structure  |x Computer simulation  |2 fast 
650 7 |a Proteins  |x Structure  |x Mathematical models  |2 fast 
758 |i has work:  |a Lecture notes on computational structural biology (Text)  |1 https://id.oclc.org/worldcat/entity/E39PCGmVtyCfcFQvrwkPcKrwYd  |4 https://id.oclc.org/worldcat/ontology/hasWork 
776 0 8 |i Print version:  |a Wu, Zhijun.  |t Lecture notes on computational structural biology.  |d Singapore, SG : World Scientific, ©2008  |w (DLC) 2009275856 
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