Bioinformatics Research and Development First International Conference, BIRD 2007, Berlin, Germany, March 12-14, 2007, Proceedings /

This volume contains the papers which were selected for oral presentation at the first Bioinformatics Research and Development (BIRD) conference held in Berlin, Germany during March 12-14, 2007. BIRD covers a wide range of topics related to bioinformatics like microarray data, genomics, single nucle...

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Detalles Bibliográficos
Clasificación:Libro Electrónico
Autor Corporativo: SpringerLink (Online service)
Otros Autores: Hochreiter, Sepp (Editor ), Wagner, Roland (Editor )
Formato: Electrónico eBook
Idioma:Inglés
Publicado: Berlin, Heidelberg : Springer Berlin Heidelberg : Imprint: Springer, 2007.
Edición:1st ed. 2007.
Colección:Lecture Notes in Bioinformatics, 4414
Temas:
Life sciences.
Bioinformatics.
Data mining.
Artificial intelligence.
Information storage and retrieval systems.
Computer science-Mathematics.
Mathematical statistics.
Life Sciences.
Computational and Systems Biology.
Data Mining and Knowledge Discovery.
Artificial Intelligence.
Information Storage and Retrieval.
Probability and Statistics in Computer Science.
Acceso en línea:Texto Completo
Tabla de Contenidos:
  • Session 1: Microarray and Systems Biology I (Networks)
  • Bayesian Inference of Gene Regulatory Networks Using Gene Expression Time Series Data
  • Biological Network Inference Using Redundancy Analysis
  • A Novel Graph Optimisation Algorithm for the Extraction of Gene Regulatory Networks from Temporal Microarray Data
  • Session 2: Microarray and Systems Biology II
  • Analysing Periodic Phenomena by Circular PCA
  • Identification of Cold-Induced Genes in Cereal Crops and Arabidopsis Through Comparative Analysis of Multiple EST Sets
  • Mining Spatial Gene Expression Data for Association Rules
  • Session 3: Medical, SNPs, Genomics I
  • Individualized Predictions of Survival Time Distributions from Gene Expression Data Using a Bayesian MCMC Approach
  • Comparing Logic Regression Based Methods for Identifying SNP Interactions
  • Stochastical Analysis of Finite Point Sampling of 3D Chromatin Fiber in Interphase Cell Nuclei
  • Session 4: Medical, SNPs, Genomics II
  • Structural Screening of HIV-1 Protease/Inhibitor Docking by Non-parametric Binomial Distribution Test
  • satDNA Analyzer 1.2 as a Valuable Computing Tool for Evolutionary Analysis of Satellite-DNA Families: Revisiting Y-Linked Satellite-DNA Sequences of Rumex (Polygonaceae)
  • A Soft Hierarchical Algorithm for the Clustering of Multiple Bioactive Chemical Compounds
  • Session 5: Systems Biology
  • A Novel Method for Flux Distribution Computation in Metabolic Networks
  • Inverse Bifurcation Analysis of a Model for the Mammalian G 1/S Regulatory Module
  • Weighted Cohesiveness for Identification of Functional Modules and Their Interconnectivity
  • Modelling and Simulation of the Genetic Phenomena of Additivity and Dominance via Gene Networks of Parallel Aggregation Processes
  • Session 6: Sequence Analysis I (Coding)
  • Protein Remote Homology Detection Based on Binary Profiles
  • Biological Sequences Encoding for Supervised Classification
  • Fast Search Algorithms for Position Specific Scoring Matrices
  • Session 7: Sequence Analysis II
  • A Markovian Approach for the Segmentation of Chimpanzee Genome
  • Synthetic Protein Sequence Oversampling Method for Classification and Remote Homology Detection in Imbalanced Protein Data
  • Stem Kernels for RNA Sequence Analyses
  • Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models
  • Session 8: Proteomics I
  • Patch Prediction of Protein Interaction Sites: Validation of a Scoring Function for an Online Server
  • Statistical Inference on Distinct RNA Stem-Loops in Genomic Sequences
  • Interpretation of Protein Subcellular Location Patterns in 3D Images Across Cell Types and Resolutions
  • Session 9: Proteomics II (Measurements)
  • Bayesian Inference for 2D Gel Electrophoresis Image Analysis
  • SimShiftDB: Chemical-Shift-Based Homology Modeling
  • Annotation of LC/ESI-MS Mass Signals
  • Session 10: Proteomics III (Structure)
  • Stochastic Protein Folding Simulation in the d-Dimensional HP-Model
  • Enhancing Protein Disorder Detection by Refined Secondary Structure Prediction
  • Joining Softassign and Dynamic Programming for the Contact Map Overlap Problem
  • Session 11: Databases, Web and Text Analysis
  • An Evaluation of Text Retrieval Methods for Similarity Search of Multi-dimensional NMR-Spectra
  • Ontology-Based MEDLINE Document Classification
  • Integrating Mutations Data of the TP53 Human Gene in the Bioinformatics Network Environment
  • Efficient and Scalable Indexing Techniques for Biological Sequence Data.

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